Difference between revisions of "Ymesfin Week 9"
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[[Media: HW_ymesfin_data_dHAP4.txt| dHAP4 Stem Data]] | [[Media: HW_ymesfin_data_dHAP4.txt| dHAP4 Stem Data]] | ||
| − | + | [[Media: Ymesfin dHAP4 sanity check and stem.pptx| dHAP4 P-Values and Stem Results]] | |
[[Media: Ymesfin_dHAP4_genelist.zip| dHAP4 Gene List]] | [[Media: Ymesfin_dHAP4_genelist.zip| dHAP4 Gene List]] | ||
Revision as of 15:14, 26 October 2019
Contents
Purpose
Methods
- Why did you select this profile? In other words, why was it interesting to you?
- I chose Profile 48 because it was the third most significant profile and the expression of the gene appeared parabolic.
- How many genes belong to this profile?
- 256 genes are associated with this profile.
- How many genes were expected to belong to this profile?
- 32.6 genes were expected to be associated with this profile.
- What is the p-value for the enrichment of genes in this profile?
- The p-value of enrichment for this profile is 1.8E-141
- How many GO terms are associated with this profile at p < 0.05?
- 35 terms associated with this profile have a p-value < 0.05.
- How many GO terms are associated with this profile with a corrected p value < 0.05?
- Only one term associated with this profile had a corrected p value < 0.05.
Results
Data and Files
dHAP4 P-Values and Stem Results
