Difference between revisions of "Vkuehn Week 10"

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(Annotated Bibliography of Genomics Papers for your Species)
 
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===Annotated Bibliography of Genomics Papers for your Species===
*The Genome of the Kinetoplastid Parasite, Leishmania major
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:In order to find these articles I used the link given to us below.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1470643/
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http://libguides.lmu.edu/BIOL367
*A physical map of the Leishmania major Friedlin genome.
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:I mostly used PubMed and Web of Science as databases to narrow down the search. When I found the reference genome article it was using PubMed. This article was later approved from Kevin.\
http://www.ncbi.nlm.nih.gov/pubmed/9477341
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:Another helpful tool in finding papers with the correct data was the Array Express database. This allows the search for papers about a specific genome and describes the data type in a column next to the article title.
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==Reference Genome Article:==
 
*Genomic Organization of Leishmania Species
 
*Genomic Organization of Leishmania Species
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279888/
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279888/
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==Possible Research Articles:==
 
*Comparative genomic analysis of three Leishmania species that cause diverse human disease
 
*Comparative genomic analysis of three Leishmania species that cause diverse human disease
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2592530/
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2592530/
*Genomic organization, transcription, splicing and gene regulation in Leishmania
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*: This article was found using PubMed as well, I searched genome and the species name and found this one especuially interesting because it analyzed the human disease capabilities of the parasite.
http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=CitingArticles&qid=7&SID=2AKsr1uNooYKvjLhKkf&page=1&doc=9&cacheurlFromRightClick=no
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*Putting the Leishmania genome to work: functional genomics by transposon trapping and expression profiling
 
*Putting the Leishmania genome to work: functional genomics by transposon trapping and expression profiling
 
http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=CitingArticles&qid=12&SID=2AKsr1uNooYKvjLhKkf&page=1&doc=3&cacheurlFromRightClick=no
 
http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=CitingArticles&qid=12&SID=2AKsr1uNooYKvjLhKkf&page=1&doc=3&cacheurlFromRightClick=no
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1692916/pdf/11839181.pdf
 
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1692916/pdf/11839181.pdf
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*: This article was found using Web of Knowledge. I found this paper interesting as well because it also looked at the genome and which part may be involved in causing disease. I am not sure if the data will be accessible though.
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{{Template:Vkuehn}}
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[[Category: Journal Entry]]

Latest revision as of 17:13, 31 October 2013

[edit] Annotated Bibliography of Genomics Papers for your Species

In order to find these articles I used the link given to us below.

http://libguides.lmu.edu/BIOL367

I mostly used PubMed and Web of Science as databases to narrow down the search. When I found the reference genome article it was using PubMed. This article was later approved from Kevin.\
Another helpful tool in finding papers with the correct data was the Array Express database. This allows the search for papers about a specific genome and describes the data type in a column next to the article title.

[edit] Reference Genome Article:

  • Genomic Organization of Leishmania Species

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3279888/

[edit] Possible Research Articles:

  • Comparative genomic analysis of three Leishmania species that cause diverse human disease

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2592530/

  • This article was found using PubMed as well, I searched genome and the species name and found this one especuially interesting because it analyzed the human disease capabilities of the parasite.
  • Putting the Leishmania genome to work: functional genomics by transposon trapping and expression profiling

http://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=CitingArticles&qid=12&SID=2AKsr1uNooYKvjLhKkf&page=1&doc=3&cacheurlFromRightClick=no http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1692916/pdf/11839181.pdf

  • This article was found using Web of Knowledge. I found this paper interesting as well because it also looked at the genome and which part may be involved in causing disease. I am not sure if the data will be accessible though.
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