Difference between revisions of "TATK Week 15 Status Report"
From LMU BioDB 2013
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==Project Progress== | ==Project Progress== | ||
*Coding and QA assurance complete | *Coding and QA assurance complete | ||
| + | *Gex files uploaded | ||
*Working on final processing of GenMapp data and pathway creation | *Working on final processing of GenMapp data and pathway creation | ||
| + | *Tauras and Alina started formatting final deliverable documents | ||
==Important Numbers and Results== | ==Important Numbers and Results== | ||
| Line 21: | Line 23: | ||
===Alina=== | ===Alina=== | ||
| + | *'''What worked?''' | ||
| + | We were able to compare the gene IDs in excel to make sure the errors were not found in the original XML file. Since none of the IDs matched the original file, there is nothing further we could do to correct the errors. | ||
| + | *'''What didn't work?''' | ||
| + | All of the data that I worked with was used without any obstacles. | ||
| + | *'''What will I do next to fix what didn't work?''' | ||
| + | Overall, there wasn't really anything that didn't work, so I will continue to strive to work without any obstacles while completing the rest of the project. | ||
| + | |||
| + | [[User:Ajvree|Ajvree]] ([[User talk:Ajvree|talk]]) 20:33, 5 December 2013 (PST) | ||
==Template== | ==Template== | ||
{{Template:Team ATK}} | {{Template:Team ATK}} | ||
Latest revision as of 04:33, 6 December 2013
Contents |
[edit] Project Progress
- Coding and QA assurance complete
- Gex files uploaded
- Working on final processing of GenMapp data and pathway creation
- Tauras and Alina started formatting final deliverable documents
[edit] Important Numbers and Results
- numbers of significant p-values by hour for TIGR4
- 4hr - 1218
- 12hr - 1902
- 24hr - 918
- 48hr - 129
- 333 errors resulted from GenMAPP import of TIGR4 data
- None of the gene IDs were found in the XML file, indicating there was no accompanying code issue
[edit] Reflections
[edit] Tauras
[edit] Kevin
[edit] Alina
- What worked?
We were able to compare the gene IDs in excel to make sure the errors were not found in the original XML file. Since none of the IDs matched the original file, there is nothing further we could do to correct the errors.
- What didn't work?
All of the data that I worked with was used without any obstacles.
- What will I do next to fix what didn't work?
Overall, there wasn't really anything that didn't work, so I will continue to strive to work without any obstacles while completing the rest of the project.
Ajvree (talk) 20:33, 5 December 2013 (PST)
[edit] Template
| Alina's User Page | Kevin's User Page | Tauras's User Page |
| Biological Databases Class Page | Gene Database Project | Gene Database Project Report Guidelines |
- Import Export Cycle 1: tATK Export One: TIGR4 Testing Report
- Import Export Cycle 2: tATK E2: TIGR4 Testing Report
- Import Export Cycle 3: tATK E3: TIGR4 Testing Report
- Import Export Cycle 4: tATK E4: TIGR4 Testing Report
| Project Roles: | Project Manager | Coder | GenMAPP User | Quality Assurance |
