File list
This special page shows all uploaded files.
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| Date | Name | Thumbnail | Size | Description | Versions |
|---|---|---|---|---|---|
| 21:29, 17 December 2015 | GÉNialOMICS Gene Database Testing Report (Build 4 Export) - LMU BioDB 2015.pdf (file) |  |
378 KB | modified pdf, cleaned it up | 2 |
| 21:26, 17 December 2015 | XmlpipedbmatchOUTPUT GEN BL14 20151201.png (file) |  |
11 KB | 2 | |
| 06:50, 15 December 2015 | BioDB Final Presentation GEN 20151214.pdf (file) | |
1.77 MB | slides for final presentation as pdf, genialomics | 1 |
| 06:24, 15 December 2015 | ReadMe Bc-Std GEN Build4 20151214 final.pdf (file) | |
220 KB | final readme for deliverables, in pdf format | 1 |
| 06:18, 15 December 2015 | ReadMe Bc-Std GEN Build4 20151214.zip (file) |  |
187 KB | final readme for deliverables section (w/ schema) week 15, bl | 1 |
| 04:15, 12 December 2015 | Exceptions analysis from GenMAPP builder GEN BL15 20151211.xlsx (file) | |
116 KB | file was from week14, forgot to upload it then; will be included in build 3/4 gene database export report | 1 |
| 07:34, 8 December 2015 | GEN BL14 20151203.zip (file) | |
35.4 MB | for 12/03/15, week 14 files, compressed | 1 |
| 07:34, 8 December 2015 | GEN BL14 20151204.zip (file) | |
31.07 MB | for 12/04/15, week 14 files, compressed | 1 |
| 07:30, 8 December 2015 | GEN BL14 20151207.zip (file) | |
5.37 MB | for 12/07/15, week 14 files, compressed | 1 |
| 07:26, 8 December 2015 | GEN BL14 20151201.zip (file) | |
26.38 MB | part 1 of week 14 files, compressed | 1 |
| 05:45, 8 December 2015 | Bc-Std GEN Build3 20151203.zip (file) | |
3.29 MB | exported gdb from build 3 of the modified genmapp builder | 1 |
| 05:39, 8 December 2015 | Build4OriginalRowCounts GEN BL14 20151204.png (file) |  |
33 KB | GENIALOMICS WEEK 14: from build 4, original row counts found using mdb viewer | 1 |
| 05:27, 8 December 2015 | Build4tallyengine results GEN BL14 20151204.png (file) |  |
10 KB | build 4 tallyengine results, export Q/A, week 14, conducted 12/4 | 1 |
| 05:19, 8 December 2015 | Bc-Std GEN Build4 20151204.zip (file) | |
3.28 MB | gdb exported using the build 4 of the modified genmapp builder | 1 |
| 04:34, 8 December 2015 | Build3OriginalRowCounts GEN BL14 20151203.png (file) |  |
33 KB | BUILD 3 of custom genmapp builder, originalrowcounts from gdb | 1 |
| 04:25, 8 December 2015 | Build2ExportOriginalRowCounts GEN BL14 20151201.png (file) |  |
33 KB | (BUILD2)original row counts for the build 2 export of j2315 | 1 |
| 04:13, 8 December 2015 | Build3tallyengine results GEN BL14 20151203.png (file) |  |
9 KB | output for tallyengine, build 3 export of gdb | 1 |
| 04:00, 8 December 2015 | Bc-Std Build2 GEN BL14 20151201.zip (file) | |
2.87 MB | compressed zip of the exported gdb using second build of a modified GenMAPP builder | 1 |
| 03:22, 8 December 2015 | Tallyengine results GEN BL14 20151201.png (file) |  |
9 KB | tallyengine results for build 2 of custom genmapp builder, export. wk14, 12/01/15. GENIALOMICS | 1 |
| 19:50, 7 December 2015 | UniProt Results 2 12.1 GEN BL14 20151201.png (file) |  |
164 KB | confirmation of the need to use ORF, rather than OrderedLocusNames | 1 |
| 19:35, 7 December 2015 | XML exploration GEN BL14 20151201.png (file) |  |
111 KB | XML exploration regarding the OrderedLocusName data | 1 |
| 20:40, 5 December 2015 | Bc-Std GEN 20151204.zip (file) | |
3.28 MB | Build 4 GenMAPP builder export of gdp | 1 |
| 04:57, 24 November 2015 | ORIG GEN BL12.zip (file) | |
23.79 MB | compressed starting files for the week 12 assignment (in the correct file name format) | 1 |
| 04:49, 24 November 2015 | WEEK12FILES GEN BL.zip (file) | |
42.6 MB | Week 12 working files and products | 1 |
| 04:46, 24 November 2015 | Compressed Starting Files (source data).zip (file) | |
23.79 MB | Compressed initial files for the week 12 work | 1 |
| 03:25, 24 November 2015 | J2315MODGENES GEN BL12 20151123.png (file) |  |
30 KB | model organism database information regarding J2315 and its genes (annotated, CDSs, etc) Week 12 | 1 |
| 02:43, 24 November 2015 | OriginalRowCounts(initial export) GEN BL12 20151123.png (file) | _GEN_BL12_20151123.png) |
33 KB | original row counts for initial export of j2315 data | 1 |
| 06:38, 22 November 2015 | PSQL GeneNameType Table GEN BL12 20151119.png (file) |  |
28 KB | PSQL table from the initial export testing, week 12 | 1 |
| 05:57, 22 November 2015 | Match Output GEN BL12 20151119.png (file) |  |
13 KB | match results for the first set of commands for the initial export, week 12 | 1 |
| 00:57, 22 November 2015 | TallyEngine Output Initial GEN BL12 20151119(1).png (file) | .png) |
9 KB | made an error with the old tallyengine output, week12 | 1 |
| 00:09, 22 November 2015 | UniProt Data Table GEN BL12 20151119.png (file) |  |
43 KB | sample of the uniprot data for J2315, week 12 | 1 |
| 23:33, 21 November 2015 | TallyEngine Output Initial GEN BL12 20151119.png (file) |  |
9 KB | output of tallyengine for the initial export/import cycle | 1 |
| 09:46, 21 November 2015 | Uniprot-taxonomy-216591 GEN BL12 20151119.zip (file) | |
4.43 MB | xml file from week 12 initial export/import | 1 |
| 09:46, 21 November 2015 | Bc-Std GEN BL12 20151119.zip (file) | |
3.08 MB | gdb file from week 12 initial export/import | 1 |
| 09:44, 21 November 2015 | Go daily-termdb GEN BL12 20151119.zip (file) | |
4.25 MB | OBO/XML file from the initial export/import Week 12 | 1 |
| 09:44, 21 November 2015 | 31277.B cepacia GEN BL12 20151119.zip (file) | |
402 KB | GOA file from the initial export/import Week 12 | 1 |
| 11:31, 17 November 2015 | Genome Presentation - Anu and Brandon - Genialomics(FIXED).pdf (file) | |
1.76 MB | fixed a typo | 1 |
| 08:02, 17 November 2015 | Genome Presentation - Anu and Brandon - Genialomics.pdf (file) | |
1.76 MB | forgot to upload these earlier! oops | 1 |
| 02:35, 16 November 2015 | Sample search results MOD BL 11.15.png (file) |  |
174 KB | sample search conducted for week 11 | 1 |
| 23:04, 12 November 2015 | Final TestSearch BL.png (file) |  |
27 KB | last conducted search on the possible MOD | 1 |
| 22:50, 12 November 2015 | BL testSearch 2.png (file) |  |
6 KB | second test search for the MOD | 1 |
| 22:42, 12 November 2015 | Test search BL.png (file) |  |
5 KB | test search for possible MOD | 1 |
| 07:31, 3 November 2015 | Match analysis BL week9.xlsx (file) | |
365 KB | excel file w/ the match analysis | 1 |
| 07:13, 3 November 2015 | TOP GO terms BL week 9.png (file) |  |
365 KB | TOP GO terms found using the new database | 1 |
| 07:12, 3 November 2015 | BL original row counts, 2015.png (file) |  |
33 KB | original row counts table from the 2015 database | 1 |
| 07:10, 3 November 2015 | BL original row counts, 2010.png (file) |  |
31 KB | original row counts found using software for the 2010 model database | 1 |
| 05:28, 3 November 2015 | Pgsql issuerow BL wk9.png (file) |  |
10 KB | screen shot of the problematic row (via pgAdmin III) week 9 | 1 |
| 03:36, 1 November 2015 | BL PSQL COUNT WEEK9.png (file) |  |
31 KB | using pgadmin iii to test the counts found using tallyengine week9 | 1 |
| 03:33, 1 November 2015 | BL MATCHUTILITY WEEK9.png (file) |  |
13 KB | output of xmlpipedb match, for week9 | 1 |
| 23:16, 31 October 2015 | Vc-Std 20151027 BL.zip (file) | |
4.28 MB | compressed Vc-Std_20151027_BL.gdb | 1 |
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