Difference between revisions of "Heavy Metal HaterZ Deliverables"
From LMU BioDB 2015
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===Gene Database=== | ===Gene Database=== | ||
| − | * [[File:So-Std_HMH_20151214.zip| GenMAPP Gene Database for assigned species]] | + | * [[File:So-Std_HMH_20151214.zip | GenMAPP Gene Database for assigned species]] |
* ReadMe file to accompany the Gene Database (''.pdf'') | * ReadMe file to accompany the Gene Database (''.pdf'') | ||
| − | ** Shewanella onedensis ReadMe | + | ** [[Media:ReadMe So-Std 20151214.pdf | Shewanella onedensis ReadMe]] |
** Include Gene Database Schema diagram in ReadMe | ** Include Gene Database Schema diagram in ReadMe | ||
*** Sample schema in Adobe Illustrator format: [[Media:Vibrio_schema_20101022.zip | Vibrio_schema_20101022.zip]] | *** Sample schema in Adobe Illustrator format: [[Media:Vibrio_schema_20101022.zip | Vibrio_schema_20101022.zip]] | ||
Revision as of 03:47, 15 December 2015
Contents
Shewanella oneidensis
Our Gene Database Testing Report
Group Paper - File:Final Report 20151218 2 HMH.docx
Group Members
- Coder: Mary Alverson
- GenMAPP User & Project Manager: Ron Legaspi
- Quality Assurance: Josh Kuroda
- GenMAPP User: Emily Simso
Important Links
Our Files
Our Deliverables
| Gene Database Project Links | |||||||
|---|---|---|---|---|---|---|---|
| Overview | Deliverables | Reference Format | Guilds | Project Manager | GenMAPP User | Quality Assurance | Coder |
| Teams | Heavy Metal HaterZ | The Class Whoopers | GÉNialOMICS | Oregon Trail Survivors | |||
| Individual Journal Entries | ||||
|---|---|---|---|---|
| Mary Alverson | Week 11 | Week 12 | Week 14 | Week 15 |
| Emily Simso | Week 11 | Week 12 | Week 14 | Week 15 |
| Ron Legaspi | Week 11 | Week 12 | Week 14 | Week 15 |
| Josh Kuroda | Week 11 | Week 12 | Week 14 | Week 15 |
Group Files and Datasets
Gene Database
- File:So-Std HMH 20151214.zip
- ReadMe file to accompany the Gene Database (.pdf)
- Shewanella onedensis ReadMe
- Include Gene Database Schema diagram in ReadMe
- Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip
- Gene Database Testing Report for final submitted Gene Database
- Processed and analyzed DNA microarray dataset (.xls or .xlsx)
- Data file used for import into GenMAPP
- GenMAPP Expression Dataset file
- Exceptions file of data imported into GenMAPP
- Raw MAPPFinder results files:
- .gmf file
- Filtered MAPPFinder Results (.xls or .xlsx)
- Sample MAPP file of a relevant biological pathway for your species (.mapp)
- Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc, .docx, or .pdf)
- PowerPoint presentation (.ppt, .pptx, or .pdf, given on Tuesday, December 15)
