Heavy Metal HaterZ Deliverables

Shewanella oneidensis

Our Gene Database Testing Report

Group Paper - File:Final Report 20151218 2 HMH.docx

Group Members

• Coder: Mary Alverson
• GenMAPP User & Project Manager: Ron Legaspi
• Quality Assurance: Josh Kuroda
• GenMAPP User: Emily Simso

Important Links

Our Deliverables

Gene Database Project Links
Overview	Deliverables	Reference Format	Guilds	Project Manager	GenMAPP User	Quality Assurance	Coder
			Teams	Heavy Metal HaterZ	The Class Whoopers	GÉNialOMICS	Oregon Trail Survivors

Individual Journal Entries
Mary Alverson	Week 11	Week 12	Week 14	Week 15
Emily Simso	Week 11	Week 12	Week 14	Week 15
Ron Legaspi	Week 11	Week 12	Week 14	Week 15
Josh Kuroda	Week 11	Week 12	Week 14	Week 15

Group Files and Datasets

• GenMAPP Gene Database for assigned species
• ReadMe file to accompany the Gene Database (.pdf)
  • Sample ReadMe in Word format: ReadMe_Vc-Std_External_20131122.zip
  • Sample ReadMe in markdown (a work in progress)
  • Include Gene Database Schema diagram in ReadMe
    • Sample schema in Adobe Illustrator format: Vibrio_schema_20101022.zip
• Gene Database Testing Report for final submitted Gene Database
• Processed and analyzed DNA microarray dataset (.xls or .xlsx)
• Data file used for import into GenMAPP (.txt or .csv)
• GenMAPP Expression Dataset file (.gex)
• Exceptions file of data imported into GenMAPP (.EX.txt)
• Raw MAPPFinder results files (-GO.txt)
• .gmf file
• Filtered MAPPFinder Results (.xls or .xlsx)
• Sample MAPP file of a relevant biological pathway for your species (.mapp)
• Group Report describing the creation of the Gene Database and the biological analysis of the data (.doc, .docx, or .pdf)
• PowerPoint presentation (.ppt, .pptx, or .pdf, given on Tuesday, December 15)

Gene Database Project Deliverables