Heavy Metal HaterZ Deliverables

Shewanella oneidensis

Our Gene Database Testing Report

Group Paper - File:Final Report 20151218 2 HMH.docx

Group Members

• Coder: Mary Alverson
• GenMAPP User & Project Manager: Ron Legaspi
• Quality Assurance: Josh Kuroda
• GenMAPP User: Emily Simso

Important Links

Our Deliverables

Gene Database Project Links
Overview	Deliverables	Reference Format	Guilds	Project Manager	GenMAPP User	Quality Assurance	Coder
			Teams	Heavy Metal HaterZ	The Class Whoopers	GÉNialOMICS	Oregon Trail Survivors

Individual Journal Entries
Mary Alverson	Week 11	Week 12	Week 14	Week 15
Emily Simso	Week 11	Week 12	Week 14	Week 15
Ron Legaspi	Week 11	Week 12	Week 14	Week 15
Josh Kuroda	Week 11	Week 12	Week 14	Week 15

Individual Assessments and Reflections

Malverso Assessments & Reflections

Emily Simso (on Week 15 Assignment Page)

Group Files and Datasets

Gene Database

• GenMAPP Gene Database for assigned species
• ReadMe file to accompany the Gene Database (.pdf)
  • Shewanella onedensis ReadMe
• Gene Database Testing Report for final submitted Gene Database
• Processed and analyzed DNA microarray dataset (.xls or .xlsx)
  • File:UpdatedCompiledRawData WithGenMAPP 20151210 ES HMH.xlsx
• Data file used for import into GenMAPP
• GenMAPP Expression Dataset file
• Exceptions file of data imported into GenMAPP
• Raw MAPPFinder results files:
  • criterion 0
  • criterion 1
• .gmf file
• Filtered MAPPFinder Results (.xls or .xlsx)
  • criterion 0
  • criterion 1
• Sample MAPP file of a relevant biological pathway for your species (.mapp)
  • File:Fatty Acid Degradation Soneidensis 20151213 HMH.mapp
  • File:Compiled Fatty Acid Degradation 20151216 HMH.mapp
  • File:Ribosomal Soneidensis 20151213 HMH.mapp
  • File:Compiled Ribosome 20151216 HMH.mapp
• File:Final Report 20151218 2 HMH.docx
• PowerPoint presentation given on Tuesday, December 15

Gene Database Project Deliverables