Knguye66 Eyoung20 Week 15
Combined Individual Journals for Kaitlyn Nguyen and Emma Young (Data Analysts).
Contents
Purpose
The purpose of this assignment is to record our progress towards the FunGals group deliverables as the Data Analysts for this week and the future weeks to come. The purpose of week 12 specifically was to download and adapt the data to the formatting we need for analysis. Then to begin the analysis with ANOVA and preparations for STEM.
Methods and Results: Progress
Progress 11/21/19
Conclusion
The first stage of our group's project was completed via referencing Week 8 and using Microsoft Excel to complete the tasks. The excel file will be located in the FunGals page for viewing and download. We were able to successfully complete the ANOVA analysis and correct found mistakes. We were able to complete a sanity check with results showing. For the sanity check the unadjusted p- values showed 37.2% of the genes had a p<0.05, 18.16% had a p<0.01, 5.04% have p<0.001, and 0.87% have p<0.0001. The sanity check for the Bonferroni-corrected p-value 0.11% of the genes have p<0.05. For the sanity check on the Benjamini and Hochberg-corrected p-value 16.36% go the genes had a p <0.05. Finally we were able to prepare the Data to run STEM in the next step of working on this project.
Data and files
Acknowledgements
This section is in acknowledgement to partner Kaitlyn Nguyen (User:knguye66), Michael Armas (User:Marmas), as well as, Iliana Crespin (User:Icrespin), and Emma Young (User:eyoung20). We would also like to acknowledge Dr. Dahlquist (User:KDahlquist) for introducing and teaching the topic and direction of this assignment. Also to acknowledge that this is a shared electronic notebook between Kaitlyn Nguyen and Emma Young.
"Except for what is noted above, this individual journal entry was completed by me and not copied from another source." Knguye66 (talk) 18:49, 20 November 2019 (PST)
"Except for what is noted above, this individual journal entry was completed by me and not copied from another source." Eyoung20 (talk) 16:40, 25 November 2019 (PST)
References
- Dahlquist, K. (2019, November 19). Data Analysis. In Wikipedia, Biological Databases. Retrieved 6:25, November 20, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Data_Analysis
- Dahlquist, K. (2019, November 20). Final Project Deliverables. In Wikipedia, Biological Databases. Retrieved 6:25, November 20, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_12/13https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Final_Project_Deliverables
- Dahlquist, K. (2019, November 19). Week 12/13. In Wikipedia, Biological Databases. Retrieved 6:25, November 20, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_12/13
- Dahlquist, K. (2019, October 17). Week 8. In Wikipedia, Biological Databases. Retrieved 6:30, October 21, 2019, from https://xmlpipedb.cs.lmu.edu/biodb/fall2019/index.php/Week_8
User Page
User:knguye66
Template Page
Template:knguye66
