Hivanson Week 9

Begin by recording in your wiki, the strain that you will analyze, the filename, the number of replicates for each strain and each time point in your data.

Strain name: ∆CIN5 strain

Filename: HI_BIOL367_S24_microarray-data_dCIN5.xcls

Number of replicates per strain: 4

Timepoints: 15 minutes, 30 minutes, 60 minutes, 90 minutes, 120 minutes

How many genes have p < 0.05? and what is the percentage (out of 6189)?

2290 genes; 37.0%

How many genes have p < 0.01? and what is the percentage (out of 6189)?

1380 genes; 22.3%

How many genes have p < 0.001? and what is the percentage (out of 6189)?

691 genes; 11.2%

How many genes have p < 0.0001? and what is the percentage (out of 6189)?

358 genes; 5.8%

How many genes are p < 0.05 for the Bonferroni-corrected p value? and what is the percentage (out of 6189)?

151 genes; 2.4%

How many genes are p < 0.05 for the Benjamini and Hochberg-corrected p value? and what is the percentage (out of 6189)?

1453 genes; 23.5%

Excel microarray data as of 3/14

• Hivanson
  • Hivanson Week 1 | Week 1 Assignment
    • Class Journal Week 1
  • Hivanson Week 2 | Week 2 Assignment
    • Class Journal Week 2
  • IMD3 Hivanson and Nstojan1 Week 3 | Week 3 Assignment
    • Class Journal Week 3
  • NeMO Week 4 | Week 4 Assignment
    • Class Journal Week 4
  • Hivanson Week 5 | Week 5 Assignment
    • Class Journal Week 5
  • Hivanson Week 6 | Week 6 Assignment
    • Class Journal Week 6
  • Hivanson Week 8 | Week 8 Assignment
    • Class Journal Week 8
  • Hivanson Week 9 | Week 9 Assignment
    • Class Journal Week 9
  • Hivanson Week 10 | Week 10 Assignment
    • Class Journal Week 10
  • Hivanson Week 12 | Week 12 Assignment
    • Class Journal Week 12
  • Hivanson Week 13 | Week 13 Assignment
    • Class Journal Week 13
  • Hivanson Week 14 | Week 14 Assignment
    • Class Journal Week 14
  • Hivanson Week 15 | Week 15 Assignment
    • Class Journal Week 15
• Main page

Template:Hivanson