Difference between revisions of "Hivanson Week 10"

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(→‎Data & Files: golist)
(→‎Methods/Results: picking profile 22)
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===Methods/Results===
 
===Methods/Results===
 
[[Image:HivansonstemresultsdCIN5.png|Execution results|500px]]
 
[[Image:HivansonstemresultsdCIN5.png|Execution results|500px]]
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'''Why did you select this profile? In other words, why was it interesting to you?'''
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I selected profile 22 because the overall trend of a spike only at 90 minutes is different from the rest of the profiles' trends.
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How many genes belong to this profile?
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How many genes were expected to belong to this profile?
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What is the p value for the enrichment of genes in this profile?
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 +
 
[[Image:Hivanson_dCIN5_profile0.png|500px]]
 
[[Image:Hivanson_dCIN5_profile0.png|500px]]
 
[[Image:Hivanson_dCIN5_profile2.png|500px]]
 
[[Image:Hivanson_dCIN5_profile2.png|500px]]

Revision as of 15:26, 25 March 2024

Purpose

Methods/Results

Execution results

Why did you select this profile? In other words, why was it interesting to you? I selected profile 22 because the overall trend of a spike only at 90 minutes is different from the rest of the profiles' trends. How many genes belong to this profile? How many genes were expected to belong to this profile? What is the p value for the enrichment of genes in this profile?


Hivanson dCIN5 profile0.png Hivanson dCIN5 profile2.png Hivanson dCIN5 profile7.png Hivanson dCIN5 profile9.png Hivanson dCIN5 profile22.png Hivanson dCIN5 profile38.png Hivanson dCIN5 profile45.png

Data & Files

Excel file with microarray data for dCIN5

Tab text file with dCIN5 stem data

stem dCIN5 significant profiles genelist folder

stem dCIN5 significant profiles GOlist folder

Conclusion

Acknowledgments

References

Template:Hivanson

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