Hivanson Week 10

Methods/Results

Why did you select this profile? In other words, why was it interesting to you? I selected profile 22 because the overall trend of a spike only at 90 minutes is different from the rest of the profiles' trends.

How many genes belong to this profile? 46 genes belong to profile 22.

How many genes were expected to belong to this profile? 23.6 genes were expected to be in profile 22.

What is the p value for the enrichment of genes in this profile? 2.3E-5

How many GO terms are associated with this profile at p < 0.05? 25

How many GO terms are associated with this profile with a corrected p value < 0.05? 7

GO ID Definitions

GO ID	Definition
GO:0034599	cellular response to oxidative stress
GO:0005737	cytoplasm
GO:0006897	endocytosis
GO:0030479	actin cortical patch
GO:0005856	cytoskeleton
GO:0000324	fungal-type vacuole

Data & Files

Excel file with microarray data for dCIN5

Tab text file with dCIN5 stem data

stem dCIN5 significant profiles genelist folder

stem dCIN5 significant profiles GOlist folder

References

• Hivanson
  • Hivanson Week 1 | Week 1 Assignment
    • Class Journal Week 1
  • Hivanson Week 2 | Week 2 Assignment
    • Class Journal Week 2
  • IMD3 Hivanson and Nstojan1 Week 3 | Week 3 Assignment
    • Class Journal Week 3
  • NeMO Week 4 | Week 4 Assignment
    • Class Journal Week 4
  • Hivanson Week 5 | Week 5 Assignment
    • Class Journal Week 5
  • Hivanson Week 6 | Week 6 Assignment
    • Class Journal Week 6
  • Hivanson Week 8 | Week 8 Assignment
    • Class Journal Week 8
  • Hivanson Week 9 | Week 9 Assignment
    • Class Journal Week 9
  • Hivanson Week 10 | Week 10 Assignment
    • Class Journal Week 10
  • Hivanson Week 12 | Week 12 Assignment
    • Class Journal Week 12
  • Hivanson Week 13 | Week 13 Assignment
    • Class Journal Week 13
  • Hivanson Week 14 | Week 14 Assignment
    • Class Journal Week 14
  • Hivanson Week 15 | Week 15 Assignment
    • Class Journal Week 15
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