Revision as of 05:18, 13 November 2017

Annotated Bibliography

Al-Fageeh, Smales. (2006). Control and Regulation of the Cellular Responses to Cold Shock: the Responses in Yeast and Mammalian Systems. Biochemical Journal, 397, doi: 10.1042/BJ20060166

• PubMed Abstract: https://www.ncbi.nlm.nih.gov/pubmed/?term=Control+and+regulation+of+the+cellular+responses+to+cold+shock%3A+the+responses+in+yeast+and+mammalian+systems
• PubMed Central: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513281/
• HTML format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513281/pdf/bj3970247.pdf
• PDF format: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513281/pdf/bj3970247.pdf
• Copyright: The Biochemical Society, London. It is a scientific society.
• The publisher is Portland Press
  • This is a not-for-profit publisher.
• This article is available both online and in print.
  • LMU has not paid a fee for my access to this article.
• I could not find the data associated with this article.

Homma, Iwahashi, Komatsu. (2003) Yeast Gene Expression During Growth at Low Temperature. Cryobiology, 46, doi: 10.1016/S0011-2240(03)00028-2

• PubMed abstract: https://www.ncbi.nlm.nih.gov/pubmed/12818212
• PubMed Central:
• HTML format: http://www.sciencedirect.com/science/article/pii/S0011224003000282?via%3Dihub
• PDF format: https://ac.els-cdn.com/S0011224003000282/1-s2.0-S0011224003000282-main.pdf?_tid=aa7fa05e-c5d2-11e7-88ae-00000aacb361&acdnat=1510289609_6ec25501ce7af9dcc6b521ef8a024164
• Copyright 2003 Elsevier Science (USA). It is open access.
• The publisher is Elsevier.
  • This is a for-profit publisher
• This article is available both online and in print.
  • LMU has not paid a fee for my access to this article.
• I could not find the data associated with this article.

Keyword search in each of the following databases:

• PubMed
  • What original keyword(s) did you use? How many results did you get?
    • The keywords I used were: "yeast DNA freeze"
    • I got 130 results.
  • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • The terms which narrow down the search were: "yeast cold shock microarray". I got 6 results.
• Google Scholar
  • What original keyword(s) did you use? How many results did you get?
    • The keywords I used were: "yeast DNA freeze"
    • I got 150,000 results.
  • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • The terms which narrow down the search were: "yeast cold shock microarray". I still got a lot of results: 31,600.
• Web of Science
  • What original keyword(s) did you use? How many results did you get?
    • The keywords I used were: "yeast DNA freeze"
    • I got 166 results
  • Which terms in which combinations were most useful to narrow down the search? How many results did you get after narrowing the search?
    • The terms which narrow down the search were: "yeast cold shock microarray". I got 10 results.

Advanced search functions for each of these three databases/tools and answer the following:

• PubMed
  • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • The most useful advanced search functions were narrowing the date and requiring the keywords be in the title and abstract. This narrowed my results down to 3.
• Google Scholar
  • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • The most useful advanced search functions were narrowing the date and requiring that all keywords be used in the article. This narrowed my results to 12,500.
• Web of Science
  • Which advanced search functions were most useful to narrow down the search? How many results did you get?
    • The most useful advanced search functions were using specific terms as well as narrowing the date range. This narrowed my results down to 3.

Perform a prospective search on the following three review articles in Web of Science and answer the following:

1. Aguilera, J., Randez-Gil, F., & Prieto, J.A. (2007). Cold Response in Saccharomyces cerevisiae: New Functions for Old Mechanisms. FEMS Microbiological Reviews, 31, 327–341. doi: 10.1111/j.1574-6976.2007.00066.x
   • How many articles does this article cite?
     • 144
   • How many articles cite this article?
     • 77
2. Al-Fageeh, M.B. & Smales, C.M. (2006). Control and Regulation of the Cellular Responses to Cold Shock: the Responses in Yeast and Mammalian Systems. Biochemical Journal, 397, 247–259. doi: 10.1042/BJ20060166
   • How many articles does this article cite?
     • 125
   • How many articles cite this article?
     • 108
3. Thieringer, H.A., Jones, P.G.,& Inouye, M. (1998). Cold shock and adaptation. BioEssays, 20, 49–57. doi: 10.1002/(SICI)1521-1878(199801)20:1<49::AID-BIES8>3.0.CO;2-N
   • How many articles does this article cite?
   • How many articles cite this article?

Acknowledgements

References

LMU BioDB 2017. (2017). Week 11 Retrieved November 7, 2017, from https://xmlpipedb.cs.lmu.edu/biodb/fall2017/index.php/Week_11

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