Difference between revisions of "Cdomin12 Week 9"
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==Acknowledgments== | ==Acknowledgments== | ||
+ | 1. I worked with [[User:Knguye66]], [[User:Jcowan4]], and [[User:Mavila9]] for this assignment. | ||
+ | |||
+ | 2."Except for what is noted above, this individual journal entry was completed by me and not copied from another source." | ||
+ | [[User:Cdomin12|Cdomin12]] ([[User talk:Cdomin12|talk]]) 19:25, 28 October 2019 (PDT) | ||
==References== | ==References== |
Revision as of 19:25, 28 October 2019
Contents
- 1 Purpose
- 2 Methods/Results
- 2.1 Profile 48
- 2.1.1 Why did you select this profile? In other words, why was it interesting to you?
- 2.1.2 How many genes belong to this profile?
- 2.1.3 How many genes were expected to belong to this profile?
- 2.1.4 What is the p value for the enrichment of genes in this profile?
- 2.1.5 How many GO terms are associated with this profile at p < 0.05?
- 2.1.6 How many GO terms are associated with this profile with a corrected p value < 0.05?
- 2.1.7 Definitions of GO Terms
- 2.1 Profile 48
- 3 Data & Files
- 4 Conclusion
- 5 Acknowledgments
- 6 References
Purpose
Methods/Results
Profile 48
Why did you select this profile? In other words, why was it interesting to you?
It has an upward and then downward trend, which I thought would be interesting to investigate at the different time points in how it related to cold shock.
How many genes belong to this profile?
77 genes
How many genes were expected to belong to this profile?
36.7 expected genes
What is the p value for the enrichment of genes in this profile?
2.7E-9
How many GO terms are associated with this profile at p < 0.05?
4 GO terms
How many GO terms are associated with this profile with a corrected p value < 0.05?
2 GO terms
Definitions of GO Terms
GO:0008380:"The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA"
GO:0006397: "Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide"
Data & Files
Conclusion
Acknowledgments
1. I worked with User:Knguye66, User:Jcowan4, and User:Mavila9 for this assignment.
2."Except for what is noted above, this individual journal entry was completed by me and not copied from another source." Cdomin12 (talk) 19:25, 28 October 2019 (PDT)