Class Journal Week 9

Katie Miller

1. What were the main issues with the data and analysis identified by Baggerly and Coombs? What best practices enumerated by DataONE were violated? Which of these did Dr. Baggerly claim were common issues?
2. What recommendations does Dr. Baggerly recommend for reproducible research? How do these correspond to what DataONE recommends?
3. What best practices did you perform for this week's assignment?
4. Do you have any further reaction to this case after viewing Dr. Baggerly's talk?

Andrew Sandler

1. There were so many issues with the data and analysis. From not sharing the data, to misrepresentation and faulty entry. This is a simplified answer. There was truly an astounding amount of issues.
2. Dr. Baggerly recommends a few things. He recommends that Data is not just mentioned but actually shared and linked. He recommends that columns are labeled and tell which samples are used and give the code out.He recommends that there are descriptions of steps that aren't scriptable. He also recommends that they give descriptions of their planned design for experiments if they use them.
3. This week I performed best practices of writing down every step I took into my electronic notebook. I was actually talking with my psychologist and telling him how annoying I find having to write down all the steps since it took me out of focus on the task. He was the head of psychology at Yale for a while and explained to me why it is so important, so this week I was on top of it.
4. I sent the video to my cousin and dad who always make ridiculous non-scientific claims and find sketchy online science articles to back up their bad decisions.

Asandle1 (talk) 18:56, 20 March 2024 (PDT)

To User Page: User: Asandle1 To Template: Template:Asandle1

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Class Journal Week 12

Charlotte Kaplan

• What were the main issues with the data and analysis identified by Baggerly and Coombs? What best practices enumerated by DataONE were violated? Which of these did Dr. Baggerly claim were common issues?

• What recommendations does Dr. Baggerly recommend for reproducible research? How do these correspond to what DataONE recommends?

• What best practices did you perform for this week's assignment?

• Do you have any further reaction to this case after viewing Dr. Baggerly's talk?

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