Class Journal Week 9
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Contents
Katie Miller
- What were the main issues with the data and analysis identified by Baggerly and Coombs? What best practices enumerated by DataONE were violated? Which of these did Dr. Baggerly claim were common issues?
- What recommendations does Dr. Baggerly recommend for reproducible research? How do these correspond to what DataONE recommends?
- What best practices did you perform for this week's assignment?
- Do you have any further reaction to this case after viewing Dr. Baggerly's talk?
Andrew Sandler
- There were so many issues with the data and analysis. From not sharing the data, to misrepresentation and faulty entry. This is a simplified answer. There was truly an astounding amount of issues.
- Dr. Baggerly recommends a few things. He recommends that Data is not just mentioned but actually shared and linked. He recommends that columns are labeled and tell which samples are used and give the code out.He recommends that there are descriptions of steps that aren't scriptable. He also recommends that they give descriptions of their planned design for experiments if they use them.
- This week I performed best practices of writing down every step I took into my electronic notebook. I was actually talking with my psychologist and telling him how annoying I find having to write down all the steps since it took me out of focus on the task. He was the head of psychology at Yale for a while and explained to me why it is so important, so this week I was on top of it.
- I sent the video to my cousin and dad who always make ridiculous non-scientific claims and find sketchy online science articles to back up their bad decisions.
Asandle1 (talk) 18:56, 20 March 2024 (PDT)
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Assignment Pages
Journals
Individual
Class Journals
Charlotte Kaplan
- What were the main issues with the data and analysis identified by Baggerly and Coombs? What best practices enumerated by DataONE were violated? Which of these did Dr. Baggerly claim were common issues?
- What recommendations does Dr. Baggerly recommend for reproducible research? How do these correspond to what DataONE recommends?
- What best practices did you perform for this week's assignment?
- Do you have any further reaction to this case after viewing Dr. Baggerly's talk?
Assignment Pages
- Week 1
- Week 2
- Week 3
- Week 4
- Week 5
- Week 6
- Week 8
- Week 9
- Week 10
- Week 11
- Week 12
- Week 13
- Week 14
- Week 15
Individual Journal Entry Pages
- ckaplan Week 1
- ckaplan Week 2
- SIR2 Week 3
- AgeAnnoMO Week 4
- ckaplan Week 5
- ckaplan Week 6
- ckaplan Week 8
- ckaplan Week 9
- ckaplan Week 10
- ckaplan Week 11
- ckaplan Week 12
- ckaplan Week 13
- ckaplan Week 14
- ckaplan Week 15
